Researcher · Builder · Educator

I build intelligent systems that connect rigorous research with real-world products.

I am Chenyi Zi (资琛义), a Ph.D. student at HKUST(GZ), advised by Prof. Jia Li. My research spans Physical AI, agent reasoning, graph representation learning, and graph prompt learning. Before graduate school, I received my bachelor’s degree in Computer Science from the South China University of Technology, advised by Prof. Shengfeng He.

Physical AIAgent ReasoningGraph LearningAI Entrepreneurship

News

2026.08

We released R3-Bench, a benchmark for resource-rational reasoning under shared budgets.

2026.05

Our work on learning interaction priors for protein-protein interaction prediction was accepted by ICML 2026.

2026.04

Our paper ChannelMTS was accepted by KDD 2026.

2025.08

We released NPG-Muse for scaling long chain-of-thought reasoning with NP-hard graph problems.

2024.09

Two papers were accepted by NeurIPS 2024.

2024.06

Our ProG graph prompt learning benchmark was released with an open-source library.

2024.01

One paper was accepted by WWW 2024.

2024.01

One paper was accepted by ICLR 2024.

2023.09

The project website for the KDD 2023 Best Paper, All in One: Multi-Task Prompting for GNN, went online.

Entrepreneurship

2025 — Present

奥义智匣科技 · Aoyi Zhixia Technology

Founder · AI Infrastructure & Data Commerce

Building practical infrastructure for AI deployment and data-product operations. The company focuses on connecting compute, models, data pipelines, and domain knowledge into reusable capabilities for organizations adopting AI.

2023 — Present

AI for International Education

Entrepreneurial Practice · AI-native Education Services

Developing AI-assisted workflows for international education, including research and program discovery, application knowledge management, content quality control, and service automation. The work explores how retrieval, agents, and structured data can make individualized guidance more scalable and reliable.

2020 — 2026

Mathematics Competition Training Studio

Founder & Head Coach · Gold-medal Mathematics Coach

Founded and operated a mathematics competition training studio, leading curriculum design and intensive problem-solving instruction. Coached more than ten students to gold medals in the Hua Luogeng Cup, with an emphasis on mathematical thinking, proof, and long-term learning habits.

Publications

Preprint · 2026

R3-Bench: LLMs Struggle with Resource-Rational Reasoning under Shared Budgets

Peisong Wang, Zhiwei Ma, Bowen Liu, Feixue Liu, Aochuan Chen, Chenyi Zi, Hongchuan Zeng, Yuhan Li, Jia Li

Paper · Code · Dataset

Preprint · 2026

ProteinOPD: Towards Effective and Efficient Preference Alignment for Protein Design

Yulin Zhang, He Cao, Zihao Jiang, Chenyi Zi, Zhipeng Zhou, Zijing Liu, Yu Li, Jia Li, Ziqi Gao

Paper

ICML · 2026

Learning the Interaction Prior for Protein-Protein Interaction Prediction: A Model-Agnostic Approach

Ziqi Gao^, Chenyi Zi^, Zijing Liu, Ziqiao Meng, Yu Li, Jia Li

Paper

Preprint · 2025

NPG-Muse: Scaling Long Chain-of-Thought Reasoning with NP-Hard Graph Problems

Yuyao Wang, Bowen Liu, Jianheng Tang, Nuo Chen, Yuhan Li, Qifan Zhang, Chenyi Zi, Chen Zhang, Jia Li

Paper · Code

Preprint · 2025

A Survey of Cross-domain Graph Learning: Progress and Future Directions

Haihong Zhao, Zhixun Li, Chenyi Zi, Aochuan Chen, Fugee Tsung, Jia Li, Jeffrey Xu Yu

Paper · Collection

NeurIPS 2024
ProG framework

ProG: A Graph Prompt Learning Benchmark

Chenyi Zi^, Haihong Zhao^, Xiangguo Sun*, Yiqing Lin, Hong Cheng, Jia Li

NeurIPS 2024
UniGAD framework

UniGAD: Unifying Multi-level Graph Anomaly Detection

Yiqing Lin, Jianheng Tang, Chenyi Zi, H. Vicky Zhao, Yuan Yao, Jia Li*

ICLR 2024
Protein complex modelling framework

Generative Adversarial Policy Network for Modelling Protein Complexes

Tao Feng^, Ziqi Gao^, Jiaxuan You, Chenyi Zi, Yan Zhou, Chen Zhang, Jia Li*

WWW 2024
Knowledge-data alignment framework

Weakly Supervised Anomaly Detection via Knowledge-Data Alignment

Haihong Zhao, Chenyi Zi, Yang Liu, Chen Zhang, Yan Zhou, Jia Li*

Honors and Awards

  • 2023.02   National Scholarship
  • 2023.01   Yue+ Scholarship by 37 Interactive Entertainment
  • 2022.04   Finalist Prize in the 2022 ICM/MCM
  • 2022.02   First Prize in the Chinese Mathematics Competition
  • 2022.01   Third Place in Huawei Cloud GaussDB Database Competition
  • 2018.10   First Prize in National Olympiad in Mathematics in Provinces, Hunan, China

Education

  • 2023.09 – Present   Postgraduate Studies, HKUST(GZ)
  • 2023.07 – 2023.09   Research Assistant, HKUST(GZ)
  • 2019.09 – 2023.07   B.Eng. in Computer Science, South China University of Technology